Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015952555.1_cds_XP_016492160.1_82400
CDS Infomation

[gene=LOC107811695] [db_xref=GeneID:107811695] [protein=protein EARLY FLOWERING 3-like] [protein_id=XP_016492160.1] [location=complement(join(3225..4187,4302..4353,5314..5488,5564..6119,7325..7531))] [gbkey=CDS]
Sequence

ATGAAGAGAGGGAAAGATGAAGAGAGAGTAATGGGGCCAATGTTTCCAAGGCTTCATGTA
AATGATACAGAGAAAGGAGGTCCAAGAGCACCTCCAAGGAACAAGATGGCTCTTTATGAA
CAGCTTAGTATCCCTTCTCAAAGATTCAGCCCTGGTGATTTGCCTCTTAACAATAATAGT
AACAGTGTGCCTCCTTACTCAAGCCAGGGGAATGAACATGAAAGAGTTGTATTTTTCTCG
AGACAGCTTCCTGCATCAAGACATCCAGTTGAGAAGCCACATGGCCGCAGTTATGGTTCA
AATACCCCGTTGCAGAAAGTTGAGTCTAGAAAGCAAACAGAAAAGAATGATTTTAGAATT
CCCACGTTTGGTAACTTCAAGGTAGATCAGGGACATGGGAAATTTAATAACAATATTGAT
ATGGAAAAGCTCACTCCCTCTAATCAAGCAATTTCAGGGTGCTCAAACAAAGAATTGAAA
GAAATCACAGGTCTGATTACGAGACAGCTTGGTAAAATCCAGAATGGAGAGAACTCCAAA
GATCGTGCAATAAGCCGTAAATGTACCTCAGATTCTTTATCCATGGATAAGGCAGAAGGT
ATTTTGAAGCAAACTGATAAATTGTTGCATTTCAAACCGAGAAAGAATCATGCAAATACC
TTTGGTGATTTACAGAAGACCAATATTGTACGGTTACAAGTCAGACCTGATTCTCTAGTT
GATTGCACTGTCTTTGCCGGATCTGCCTTGGATGTTGATAAGGAATTCCATGAACAAAAG
ACATGTAAATCATCACAAACAGGAGAAACGGACCGGAGTGATGACTTATCAGAGACTTCT
ATGGTGGAGTGTGTATCTAAAGTGGACATATCTCCCGATGATATTGTTAGAATAATAGGA
CAAAAGCATTTCTGGAGAGCAAGACGAGCTATTGCCAACCAACAGAGAGTGCTTGCAGTC
CAAGTATTCGAGTTGCATCGACTACTCAAGGTCCAGAAACTGATAGCTAGTTCGCCAAAT
AGTATACTCGAAGATGGTTCTTCTTTAGGCAAACCTTTAAAGAGGTTGTCTACTAAAAGA
CTTGCATTGGAGTATAATGTCAAAGCACCTGAAAATGTTTCGAAACAGAAGAATGATTCT
GAGAAGCCTAACTCTAGGATGGAATCCAATGCCGAAAATGATGTAGGAGAGACATCTCTT
TCTTGCCGCAGACCACTTTCAGAAACCCCGTCACCAACACCAGTAAAACACGTTTCCCAC
ATGGGTCCGTGGCTCTTCAATCAACCTTCGGGACACCAATGGTTGATACCCGTGATGTCT
CCTTCTGAAGGACTAGTATACAAGCCACATCCTGGACCTGCATTCATGAGTCCAGTATAT
GGCGGTTGTGGACCCCCGATTCCAATGACGGGAAACTTTTTAGCTCCGGCATACTATCAA
GGAACGGGAGCTCCTTTCGCACCTCAACCTAGTCATGGCTACTTTCCTCCGTTTGACATG
CCAGTTATGAATCCAGTAATCCCATCTCCAGCTATTGATCAACCGGACCAGGTTGCTGCA
ACGGGTTTTCAAGGTCTGTTATCGAGAGATCAGGAAGTTAATTTTCACATTCAACAACAG
AACTCAAGTAATGTTGCGAGAGAGAATAATGTAGCCGCGCCAAAGGTTGTGAGATTGTAT
CCCTCTAGAGATTCTGAGTTGCAAGCCAGCACTGCAAGTAGTCCAAGGGAAAGAGGTCAT
GGATTAGACGTGGGCAACTCCACCGGAGGAAGAAGCGTGTTTCCTCTGTTCCCAACTTTT
CCTGCTATTAGCAACCCCGCTAGTAGCTCCCAGCCTCATTTTCCTAGTCATACGGCTAGA
GTTATCAAAGTTGTGCCTCGTAATGCCAGTGCTGCTACAGAATCTGCTGCTCGGATTTTT
CAGTCTATACAAGAAGAGAGAAAACAGCATTGA

Peptide Sequence

PEP ID

XP_016492160.1
PEP Infomation

PREDICTED: protein EARLY FLOWERING 3-like [Nicotiana tabacum]
Sequence

MKRGKDEERVMGPMFPRLHVNDTEKGGPRAPPRNKMALYEQLSIPSQRFSPGDLPLNNNS
NSVPPYSSQGNEHERVVFFSRQLPASRHPVEKPHGRSYGSNTPLQKVESRKQTEKNDFRI
PTFGNFKVDQGHGKFNNNIDMEKLTPSNQAISGCSNKELKEITGLITRQLGKIQNGENSK
DRAISRKCTSDSLSMDKAEGILKQTDKLLHFKPRKNHANTFGDLQKTNIVRLQVRPDSLV
DCTVFAGSALDVDKEFHEQKTCKSSQTGETDRSDDLSETSMVECVSKVDISPDDIVRIIG
QKHFWRARRAIANQQRVLAVQVFELHRLLKVQKLIASSPNSILEDGSSLGKPLKRLSTKR
LALEYNVKAPENVSKQKNDSEKPNSRMESNAENDVGETSLSCRRPLSETPSPTPVKHVSH
MGPWLFNQPSGHQWLIPVMSPSEGLVYKPHPGPAFMSPVYGGCGPPIPMTGNFLAPAYYQ
GTGAPFAPQPSHGYFPPFDMPVMNPVIPSPAIDQPDQVAATGFQGLLSRDQEVNFHIQQQ
NSSNVARENNVAAPKVVRLYPSRDSELQASTASSPRERGHGLDVGNSTGGRSVFPLFPTF
PAISNPASSSQPHFPSHTARVIKVVPRNASAATESAARIFQSIQEERKQH

Transcript Sequence

Gene sequence data has not been registered.